CRISPRone

CRISPRone report for GCA_001295285.1_ASM129528v1

♦ Seq 1: LJJQ01000126.1 Pseudomonas aeruginosa strain PASS4 contig_202, whole genome shotgun sequence

⇒Summary: seq-len = 358307 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 328661-339480 bp Zoom in on locus 1 x8 x19 CRISPR array Location: 328661-329117 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 328661-329117 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09641:cas3HD Type: Type-I Location: 329892-331844 bp Gene: unk Type: unknown Location: 331863-332573 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 332576-334144 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 334141-334671 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 334681-335823 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 335825-336487 bp Gene: pfam08798:cas6e Type: other Location: 336462-337073 bp Gene: cd09719:cas1 Type: universal Location: 337100-337990 bp Gene: pfam09707:cas2 Type: universal Location: 337987-338286 bp CRISPR array Location: 338351-339480 bp Num of repeats: 19 Spacers: s8-s25 CRISPR array Location: 338351-339480 bp Num of repeats: 19 Spacers: s8-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 328661-329117 bp]: array | spacers
           [Locus range 338351-339480 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)