CRISPRone

CRISPRone report for GCA_001295345.1_ASM129534v1

♦ Seq 1: LJJP01000127.1 Pseudomonas aeruginosa strain PASS3 contig_209, whole genome shotgun sequence

⇒Summary: seq-len = 141384 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28266-39692 bp Zoom in on locus 1 x19 x18 CRISPR array Location: 28266-29394 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 28266-29394 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 29459-29758 bp Gene: cd09719:cas1 Type: universal Location: 29755-30645 bp Gene: pfam08798:cas6e Type: other Location: 30672-31211 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 31258-31920 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 31922-33064 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 33074-33604 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 33601-35169 bp Gene: cd09641:cas3HD Type: Type-I Location: 35172-37853 bp CRISPR array Location: 38626-39692 bp Num of repeats: 18 Spacers: s19-s35 CRISPR array Location: 38626-39692 bp Num of repeats: 18 Spacers: s19-s35 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28266-29394 bp]: array | spacers
           [Locus range 38626-39692 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)