CRISPRone

CRISPRone report for GCA_001299635.1_ASM129963v1

♦ Seq 1: JRHN01000038.1 Clostridioides difficile strain CD10-165 KW95_Contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 385267 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JRHN01000036.1 Clostridioides difficile strain CD10-165 KW95_Contig_36, whole genome shotgun sequence

⇒Summary: seq-len = 57640 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 55457-55943 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JRHN01000042.1 Clostridioides difficile strain CD10-165 KW95_Contig_42, whole genome shotgun sequence

⇒Summary: seq-len = 54955 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8102-10032 bp]: array | spacers
           [Locus range 11766-11926 bp]: array | spacers
           [Locus range 11964-12712 bp]: array | spacers
           [Locus range 14578-14932 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JRHN01000047.1 Clostridioides difficile strain CD10-165 KW95_Contig_47, whole genome shotgun sequence

⇒Summary: seq-len = 309409 bp; # of CRISPR array = 3; # of cas gene = 16  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 104805-106074 bp]: array | spacers
           [Locus range 256725-257873 bp]: array | spacers
           [Locus range 257972-258725 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)