CRISPRone

CRISPRone report for GCA_001373735.1_239_10Pc_1_contigs_500

♦ Seq 1: CTDH01000042.1 Pseudomonas aeruginosa genome assembly 239_10Pc_1_contgs_500, contig NODE_32_length_48437_cov_21.0118_ID_63, whole genome shotgun sequence

⇒Summary: seq-len = 48437 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1249-11934 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 1249-2538 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 1249-2538 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 2798-3772 bp Gene: COG1203:cas3 Type: Type-I Location: 3769-6999 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7057-8361 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8348-9331 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9342-10370 bp Gene: cd09739:cas6f Type: other Location: 10374-10937 bp CRISPR array Location: 11187-11934 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 11187-11934 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1249-2538 bp]: array | spacers
           [Locus range 11187-11934 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)