CRISPRone

CRISPRone report for GCA_001373975.1_251_10Pc_2_contigs_500

♦ Seq 1: CTDP01000011.1 Pseudomonas aeruginosa genome assembly 251_10Pc_2_contgs_500, contig NODE_31_length_48062_cov_24.4534_ID_61, whole genome shotgun sequence

⇒Summary: seq-len = 48062 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 999-11684 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 999-2288 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 999-2288 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 2548-3522 bp Gene: COG1203:cas3 Type: Type-I Location: 3519-6749 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6807-8111 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8098-9081 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9092-10120 bp Gene: cd09739:cas6f Type: other Location: 10124-10687 bp CRISPR array Location: 10937-11684 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 10937-11684 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 999-2288 bp]: array | spacers
           [Locus range 10937-11684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)