CRISPRone

CRISPRone report for GCA_001374295.1_291_15_211Ba_contigs_500

♦ Seq 1: CUYB01000017.1 Pseudomonas aeruginosa genome assembly 291_15_211Ba_contgs_500, contig NODE_37_length_49364_cov_26.2126_ID_73, whole genome shotgun sequence

⇒Summary: seq-len = 49364 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36346-48345 bp Zoom in on locus 1 x19 x39 CRISPR array Location: 36346-37454 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36346-37454 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 37637-38200 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38204-39232 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39243-40226 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40213-41517 bp Gene: COG1203:cas3 Type: Type-I Location: 41575-44805 bp Gene: cd09718:cas1 Type: universal Location: 44802-45776 bp CRISPR array Location: 46038-48345 bp Num of repeats: 39 Spacers: s19-s56 CRISPR array Location: 46038-48345 bp Num of repeats: 39 Spacers: s19-s56 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36346-37454 bp]: array | spacers
           [Locus range 46038-48345 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)