CRISPRone

CRISPRone report for GCA_001374495.1_215_2_5Pc_8_contigs_500

♦ Seq 1: CUXB01000077.1 Pseudomonas aeruginosa genome assembly 215_2_5Pc_8_contgs_500, contig NODE_29_length_68021_cov_28.9758_ID_57, whole genome shotgun sequence

⇒Summary: seq-len = 68021 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20803-31488 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 20803-22092 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 20803-22092 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 22352-23326 bp Gene: COG1203:cas3 Type: Type-I Location: 23323-26553 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26611-27915 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27902-28885 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28896-29924 bp Gene: cd09739:cas6f Type: other Location: 29928-30491 bp CRISPR array Location: 30741-31488 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 30741-31488 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20803-22092 bp]: array | spacers
           [Locus range 30741-31488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)