CRISPRone

CRISPRone report for GCA_001374555.1_218_15Pc_3_contigs_500

♦ Seq 1: CUXD01000065.1 Pseudomonas aeruginosa genome assembly 218_15Pc_3_contgs_500, contig NODE_33_length_48836_cov_17.4673_ID_65, whole genome shotgun sequence

⇒Summary: seq-len = 48836 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 883-11568 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 883-2172 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 883-2172 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 2432-3406 bp Gene: COG1203:cas3 Type: Type-I Location: 3403-6633 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6691-7995 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7982-8965 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8976-10004 bp Gene: cd09739:cas6f Type: other Location: 10008-10571 bp CRISPR array Location: 10821-11568 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 10821-11568 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 883-2172 bp]: array | spacers
           [Locus range 10821-11568 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)