CRISPRone

CRISPRone report for GCA_001375055.1_263_10Pc_3_contigs_500

♦ Seq 1: CTET01000037.1 Pseudomonas aeruginosa genome assembly 263_10Pc_3_contgs_500, contig NODE_33_length_48428_cov_17.5284_ID_65, whole genome shotgun sequence

⇒Summary: seq-len = 48428 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1363-12048 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 1363-2652 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 1363-2652 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 2912-3886 bp Gene: COG1203:cas3 Type: Type-I Location: 3883-7113 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7171-8475 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8462-9445 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9456-10484 bp Gene: cd09739:cas6f Type: other Location: 10488-11051 bp CRISPR array Location: 11301-12048 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 11301-12048 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1363-2652 bp]: array | spacers
           [Locus range 11301-12048 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)