CRISPRone

CRISPRone report for GCA_001375375.1_203_2_5Pc_7_contigs_500

♦ Seq 1: CTCL01000013.1 Pseudomonas aeruginosa genome assembly 203_2_5Pc_7_contgs_500, contig NODE_26_length_80112_cov_21.2256_ID_51, whole genome shotgun sequence

⇒Summary: seq-len = 80112 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32924-43609 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 32924-34213 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 32924-34213 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 34473-35447 bp Gene: COG1203:cas3 Type: Type-I Location: 35444-38674 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38732-40036 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40023-41006 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41017-42045 bp Gene: cd09739:cas6f Type: other Location: 42049-42612 bp CRISPR array Location: 42862-43609 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 42862-43609 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32924-34213 bp]: array | spacers
           [Locus range 42862-43609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)