CRISPRone

CRISPRone report for GCA_001444955.1_ASM144495v1

♦ Seq 1: LJZE01000207.1 Pseudomonas aeruginosa strain ATCC 33358 scaffold_57, whole genome shotgun sequence

⇒Summary: seq-len = 68349 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20765-31808 bp Zoom in on locus 1 x28 x14 CRISPR array Location: 20765-22414 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 20765-22414 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09718:cas1 Type: universal Location: 22678-23652 bp Gene: COG1203:cas3 Type: Type-I Location: 23649-26879 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26937-28241 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28228-29211 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29222-30250 bp Gene: cd09739:cas6f Type: other Location: 30254-30817 bp CRISPR array Location: 31001-31808 bp Num of repeats: 14 Spacers: s28-s40 CRISPR array Location: 31001-31808 bp Num of repeats: 14 Spacers: s28-s40 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20765-22414 bp]: array | spacers
           [Locus range 31001-31808 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)