CRISPRone

CRISPRone report for GCA_001449275.1_WH-SGI-V-07071

♦ Seq 1: LLLH01000002.1 Pseudomonas aeruginosa strain WH-SGI-V-07071 WH-SGI-V-07071_contig10, whole genome shotgun sequence

⇒Summary: seq-len = 378531 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33969-42568 bp Zoom in on locus 1 x13 CRISPR array Location: 33969-34792 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 33969-34792 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09725:cas2 Type: universal Location: 34974-35264 bp Gene: cd09721:cas1 Type: universal Location: 35274-36197 bp Gene: pfam01930:cas4 Type: Type-I Location: 36317-36949 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 36968-37837 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 37849-39612 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 39609-40283 bp Gene: cd09641:cas3HD Type: Type-I Location: 40334-42568 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33969-34792 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)