CRISPRone

CRISPRone report for GCA_001449365.1_WH-SGI-V-07051

♦ Seq 1: LLLO01000045.1 Pseudomonas aeruginosa strain WH-SGI-V-07051 WH-SGI-V-07051_contig35, whole genome shotgun sequence

⇒Summary: seq-len = 47488 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36866-46348 bp Zoom in on locus 1 x12 x4 CRISPR array Location: 36866-37554 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36866-37554 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37737-38300 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38304-39332 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39343-40326 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40313-41617 bp Gene: COG1203:cas3 Type: Type-I Location: 41675-44905 bp Gene: cd09718:cas1 Type: universal Location: 44902-45876 bp CRISPR array Location: 46141-46348 bp Num of repeats: 4 Spacers: s12-s14 CRISPR array Location: 46141-46348 bp Num of repeats: 4 Spacers: s12-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36866-37554 bp]: array | spacers
           [Locus range 46141-46348 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)