CRISPRone

CRISPRone report for GCA_001451565.1_WH-SGI-V-07484

♦ Seq 1: LLPQ01000016.1 Pseudomonas aeruginosa strain WH-SGI-V-07484 WH-SGI-V-07484_contig23, whole genome shotgun sequence

⇒Summary: seq-len = 56555 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36964-47577 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 36964-37338 bp CRISPR array Location: 37166-39785 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 37166-39785 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 37381-38418 bp Gene: unk Type: unknown Location: 39238-39750 bp Gene: cd09725:cas2 Type: universal Location: 39967-40257 bp Gene: cd09721:cas1 Type: universal Location: 40267-41307 bp Gene: pfam01930:cas4 Type: Type-I Location: 41311-41943 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 41962-42831 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 42828-44621 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 44618-45292 bp Gene: cd09641:cas3HD Type: Type-I Location: 45343-47577 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37166-39785 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)