CRISPRone

CRISPRone report for GCA_001452255.1_WH-SGI-V-07643

♦ Seq 1: LLRO01000030.1 Pseudomonas aeruginosa strain WH-SGI-V-07643 WH-SGI-V-07643_contig26, whole genome shotgun sequence

⇒Summary: seq-len = 37745 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18154-28767 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 18154-18528 bp CRISPR array Location: 18356-20975 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 18356-20975 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 18571-19608 bp Gene: unk Type: unknown Location: 20428-20940 bp Gene: cd09725:cas2 Type: universal Location: 21157-21447 bp Gene: cd09721:cas1 Type: universal Location: 21457-22497 bp Gene: pfam01930:cas4 Type: Type-I Location: 22501-23133 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 23152-24021 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 24018-25811 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 25808-26482 bp Gene: cd09641:cas3HD Type: Type-I Location: 26533-28767 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18356-20975 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)