CRISPRone

CRISPRone report for GCA_001452615.1_WH-SGI-V-07699

♦ Seq 1: LLST01000053.1 Pseudomonas aeruginosa strain WH-SGI-V-07699 WH-SGI-V-07699_contig29, whole genome shotgun sequence

⇒Summary: seq-len = 65559 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18361-34119 bp Zoom in on locus 1 Gene: mkCas0090:PD-DExK Type: other Location: 18361-19086 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 27957-28277 bp Gene: pfam00078:RT Type: other Location: 32401-34119 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LLST01000054.1 Pseudomonas aeruginosa strain WH-SGI-V-07699 WH-SGI-V-07699_contig3, whole genome shotgun sequence

⇒Summary: seq-len = 510100 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 301612-302361 bp Zoom in on locus 1 x13 CRISPR array Location: 301612-302361 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 301612-302361 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 301612-302361 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)