CRISPRone

CRISPRone report for GCA_001452755.1_WH-SGI-V-07709

♦ Seq 1: LLTD01000028.1 Pseudomonas aeruginosa strain WH-SGI-V-07709 WH-SGI-V-07709_contig18, whole genome shotgun sequence

⇒Summary: seq-len = 75711 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27045-37836 bp Zoom in on locus 1 x11 x27 CRISPR array Location: 27045-27673 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 27045-27673 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 27924-28898 bp Gene: COG1203:cas3 Type: Type-I Location: 28895-32125 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 32183-33487 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 33474-34457 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 34468-35496 bp Gene: cd09739:cas6f Type: other Location: 35500-36063 bp CRISPR array Location: 36248-37836 bp Num of repeats: 27 Spacers: s11-s36 CRISPR array Location: 36248-37836 bp Num of repeats: 27 Spacers: s11-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27045-27673 bp]: array | spacers
           [Locus range 36248-37836 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)