CRISPRone

CRISPRone report for GCA_001452985.1_WH-SGI-V-07261

♦ Seq 1: LLTU01000001.1 Pseudomonas aeruginosa strain WH-SGI-V-07261 WH-SGI-V-07261_contig1, whole genome shotgun sequence

⇒Summary: seq-len = 1364618 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 921904-924106 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 921904-922311 bp Gene: unk Type: unknown Location: 922339-923025 bp Gene: COG2378:WYL Type: other Location: 923135-924106 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LLTU01000005.1 Pseudomonas aeruginosa strain WH-SGI-V-07261 WH-SGI-V-07261_contig13, whole genome shotgun sequence

⇒Summary: seq-len = 143266 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 54546-54874 bp Zoom in on locus 1 x6 CRISPR array Location: 54546-54874 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 54546-54874 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 54546-54874 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LLTU01000012.1 Pseudomonas aeruginosa strain WH-SGI-V-07261 WH-SGI-V-07261_contig2, whole genome shotgun sequence

⇒Summary: seq-len = 769152 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 89531-89740 bp Zoom in on locus 1 x4 CRISPR array Location: 89531-89740 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 89531-89740 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 89531-89740 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LLTU01000003.1 Pseudomonas aeruginosa strain WH-SGI-V-07261 WH-SGI-V-07261_contig11, whole genome shotgun sequence

⇒Summary: seq-len = 172679 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 117483-117991 bp Zoom in on locus 1 x9 CRISPR array Location: 117483-117991 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 117483-117991 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 117483-117991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)