CRISPRone

CRISPRone report for GCA_001452995.1_WH-SGI-V-07265

♦ Seq 1: LLTW01000012.1 Pseudomonas aeruginosa strain WH-SGI-V-07265 WH_SGI_V_07265_2, whole genome shotgun sequence

⇒Summary: seq-len = 858668 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 638125-648580 bp Zoom in on locus 1 x12 x9 CRISPR array Location: 638125-638825 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 638125-638825 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 639601-642282 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 642285-643853 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 643850-644380 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 644390-645532 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 645534-646196 bp Gene: pfam08798:cas6e Type: other Location: 646171-646782 bp Gene: cd09719:cas1 Type: universal Location: 646809-647699 bp Gene: pfam09707:cas2 Type: universal Location: 647696-647923 bp CRISPR array Location: 648061-648580 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 648061-648580 bp Num of repeats: 9 Spacers: s12-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 638125-638825 bp]: array | spacers
           [Locus range 648061-648580 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)