CRISPRone

CRISPRone report for GCA_001453225.1_WH-SGI-V-07501

♦ Seq 1: LLQH01000019.1 Pseudomonas aeruginosa strain WH-SGI-V-07501 WH-SGI-V-07501_contig26, whole genome shotgun sequence

⇒Summary: seq-len = 48326 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1399-11357 bp Zoom in on locus 1 x12 x12 CRISPR array Location: 1399-2087 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1399-2087 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 2347-3321 bp Gene: COG1203:cas3 Type: Type-I Location: 3318-6548 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6606-7910 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7897-8880 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8891-9919 bp Gene: cd09739:cas6f Type: other Location: 9923-10486 bp CRISPR array Location: 10670-11357 bp Num of repeats: 12 Spacers: s12-s22 CRISPR array Location: 10670-11357 bp Num of repeats: 12 Spacers: s12-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1399-2087 bp]: array | spacers
           [Locus range 10670-11357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)