CRISPRone

CRISPRone report for GCA_001453285.1_WH-SGI-V-07507

♦ Seq 1: LLQN01000020.1 Pseudomonas aeruginosa strain WH-SGI-V-07507 WH-SGI-V-07507_contig27, whole genome shotgun sequence

⇒Summary: seq-len = 58019 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36859-47903 bp Zoom in on locus 1 x13 x28 CRISPR array Location: 36859-37607 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 36859-37607 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 37856-38419 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38423-39451 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39462-40445 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40432-41736 bp Gene: COG1203:cas3 Type: Type-I Location: 41794-45024 bp Gene: cd09718:cas1 Type: universal Location: 45021-45995 bp CRISPR array Location: 46256-47903 bp Num of repeats: 28 Spacers: s13-s39 CRISPR array Location: 46256-47903 bp Num of repeats: 28 Spacers: s13-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36859-37607 bp]: array | spacers
           [Locus range 46256-47903 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)