CRISPRone

CRISPRone report for GCA_001453405.1_WH-SGI-V-07631

♦ Seq 1: LLRC01000024.1 Pseudomonas aeruginosa strain WH-SGI-V-07631 WH-SGI-V-07631_contig30, whole genome shotgun sequence

⇒Summary: seq-len = 48423 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36835-47460 bp Zoom in on locus 1 x13 x21 CRISPR array Location: 36835-37583 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 36835-37583 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 37832-38395 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38399-39427 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39438-40421 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40408-41712 bp Gene: COG1203:cas3 Type: Type-I Location: 41770-45000 bp Gene: cd09718:cas1 Type: universal Location: 44997-45971 bp CRISPR array Location: 46232-47460 bp Num of repeats: 21 Spacers: s13-s32 CRISPR array Location: 46232-47460 bp Num of repeats: 21 Spacers: s13-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36835-37583 bp]: array | spacers
           [Locus range 46232-47460 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)