CRISPRone

CRISPRone report for GCA_001453665.1_WH-SGI-V-07691

♦ Seq 1: LLSL01000001.1 Pseudomonas aeruginosa strain WH-SGI-V-07691 WH-SGI-V-07691_contig1, whole genome shotgun sequence

⇒Summary: seq-len = 897367 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 411658-412465 bp Zoom in on locus 1 x14 CRISPR array Location: 411658-412465 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 411658-412465 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 411658-412465 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LLSL01000013.1 Pseudomonas aeruginosa strain WH-SGI-V-07691 WH-SGI-V-07691_contig20, whole genome shotgun sequence

⇒Summary: seq-len = 85257 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61595-68383 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 61595-62626 bp Gene: unk Type: unknown Location: 63071-63961 bp Gene: pfam13280:WYL Type: other Location: 64241-65149 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 65162-68383 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)