CRISPRone

CRISPRone report for GCA_001454265.1_WH-SGI-V-07300

♦ Seq 1: LLUU01000084.1 Pseudomonas aeruginosa strain WH-SGI-V-07300 WH_SGI_V_07300_63, whole genome shotgun sequence

⇒Summary: seq-len = 20363 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8410-20097 bp Zoom in on locus 1 x25 x22 CRISPR array Location: 8410-9875 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 8410-9875 bp Num of repeats: 25 Spacers: s1-s24 Gene: cd09739:cas6f Type: other Location: 10059-10622 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 10626-11654 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 11665-12648 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 12635-13936 bp Gene: COG1203:cas3 Type: Type-I Location: 14347-17577 bp Gene: cd09718:cas1 Type: universal Location: 17574-18548 bp CRISPR array Location: 18809-20097 bp Num of repeats: 22 Spacers: s25-s45 CRISPR array Location: 18809-20097 bp Num of repeats: 22 Spacers: s25-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8410-9875 bp]: array | spacers
           [Locus range 18809-20097 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)