CRISPRone

CRISPRone report for GCA_001457615.1_NCTC10332

♦ Seq 1: LN831024.1 Pseudomonas aeruginosa genome assembly NCTC10332, chromosome : 1

⇒Summary: seq-len = 6316979 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1484173-1484981 bp 2 Locus 2: 2773438-2783937 bp Zoom in on locus 1 x14 Zoom in on locus 2 x17 x16 CRISPR array Location: 1484173-1484981 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1484173-1484981 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 2773438-2774427 bp Num of repeats: 17 Spacers: s14-s29 CRISPR array Location: 2773438-2774427 bp Num of repeats: 17 Spacers: s14-s29 Gene: cd09739:cas6f Type: other Location: 2774609-2775172 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2775176-2776204 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2776215-2777198 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2777185-2778489 bp Gene: COG1203:cas3 Type: Type-I Location: 2778547-2781777 bp Gene: cd09718:cas1 Type: universal Location: 2781774-2782748 bp CRISPR array Location: 2783010-2783937 bp Num of repeats: 16 Spacers: s30-s44 CRISPR array Location: 2783010-2783937 bp Num of repeats: 16 Spacers: s30-s44 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1484173-1484981 bp]: array | spacers
           [Locus range 2773438-2774427 bp]: array | spacers
           [Locus range 2783010-2783937 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)