CRISPRone

CRISPRone report for GCA_001471355.2_ASM147135v2

♦ Seq 1: LORM02000001.1 Pseudomonas aeruginosa strain FDAARGOS_154 scf7180000000010_quiver_pilon, whole genome shotgun sequence

⇒Summary: seq-len = 6800405 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6351544-6362763 bp Zoom in on locus 1 x19 x26 CRISPR array Location: 6351544-6352652 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 6351544-6352652 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 6352835-6353398 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 6353402-6354430 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6354441-6355424 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6355411-6356715 bp Gene: COG1203:cas3 Type: Type-I Location: 6356773-6360003 bp Gene: cd09718:cas1 Type: universal Location: 6360000-6360974 bp CRISPR array Location: 6361236-6362763 bp Num of repeats: 26 Spacers: s19-s43 CRISPR array Location: 6361236-6362763 bp Num of repeats: 26 Spacers: s19-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 6351544-6352652 bp]: array | spacers
           [Locus range 6361236-6362763 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)