CRISPRone

CRISPRone report for GCA_001497755.1_IT1118

♦ Seq 1: FAXM01000238.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_238, whole genome shotgun sequence

⇒Summary: seq-len = 455 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 81-441 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FAXM01000015.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 87108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14-769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FAXM01000064.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_64, whole genome shotgun sequence

⇒Summary: seq-len = 72241 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 14-769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FAXM01000186.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_186, whole genome shotgun sequence

⇒Summary: seq-len = 694 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50-609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FAXM01000134.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_134, whole genome shotgun sequence

⇒Summary: seq-len = 8522 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 210-633 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FAXM01000222.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_222, whole genome shotgun sequence

⇒Summary: seq-len = 577 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 80-563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FAXM01000151.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_151, whole genome shotgun sequence

⇒Summary: seq-len = 1497 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 509-604 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FAXM01000071.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_71, whole genome shotgun sequence

⇒Summary: seq-len = 27442 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13514-13804 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: FAXM01000006.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_6, whole genome shotgun sequence

⇒Summary: seq-len = 54577 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53083-54499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: FAXM01000168.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_168, whole genome shotgun sequence

⇒Summary: seq-len = 4746 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79-372 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: FAXM01000033.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_33, whole genome shotgun sequence

⇒Summary: seq-len = 28335 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10118-10671 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: FAXM01000053.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_53, whole genome shotgun sequence

⇒Summary: seq-len = 47721 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47105-47333 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: FAXM01000022.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_22, whole genome shotgun sequence

⇒Summary: seq-len = 150527 bp; # of CRISPR array = 0; # of cas gene = 7  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: FAXM01000116.1 Peptoclostridium difficile genome assembly IT1118, contig Contig_116, whole genome shotgun sequence

⇒Summary: seq-len = 3315 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1302-1595 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)