CRISPRone

CRISPRone report for GCA_001516185.2_ASM151618v2

♦ Seq 1: CP008870.2 Pseudomonas aeruginosa strain W36662, complete genome

⇒Summary: seq-len = 6791731 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1697192-1697941 bp 2 Locus 2: 3229320-3239919 bp Zoom in on locus 1 x13 Zoom in on locus 2 x10 x19 CRISPR array Location: 1697192-1697941 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 1697192-1697941 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3229320-3229888 bp Num of repeats: 10 Spacers: s13-s21 CRISPR array Location: 3229320-3229888 bp Num of repeats: 10 Spacers: s13-s21 Gene: cd09718:cas1 Type: universal Location: 3230139-3231113 bp Gene: COG1203:cas3 Type: Type-I Location: 3231110-3234340 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3234751-3236052 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3236039-3237022 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3237033-3238061 bp Gene: cd09739:cas6f Type: other Location: 3238065-3238628 bp CRISPR array Location: 3238812-3239919 bp Num of repeats: 19 Spacers: s22-s39 CRISPR array Location: 3238812-3239919 bp Num of repeats: 19 Spacers: s22-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1697192-1697941 bp]: array | spacers
           [Locus range 3229320-3229888 bp]: array | spacers
           [Locus range 3238812-3239919 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)