CRISPRone

CRISPRone report for GCA_001516245.2_ASM151624v2

♦ Seq 1: CP008856.2 Pseudomonas aeruginosa strain F23197, complete genome

⇒Summary: seq-len = 6517340 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1512098-1513268 bp 2 Locus 2: 2845847-2857194 bp Zoom in on locus 1 x20 Zoom in on locus 2 x16 x30 CRISPR array Location: 1512098-1513268 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 1512098-1513268 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 2845847-2846776 bp Num of repeats: 16 Spacers: s20-s34 CRISPR array Location: 2845847-2846776 bp Num of repeats: 16 Spacers: s20-s34 Gene: cd09739:cas6f Type: other Location: 2847025-2847588 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2847592-2848620 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2848631-2849614 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2849601-2850905 bp Gene: COG1203:cas3 Type: Type-I Location: 2850963-2854193 bp Gene: cd09718:cas1 Type: universal Location: 2854190-2855164 bp CRISPR array Location: 2855425-2857194 bp Num of repeats: 30 Spacers: s35-s63 CRISPR array Location: 2855425-2857194 bp Num of repeats: 30 Spacers: s35-s63 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1512098-1513268 bp]: array | spacers
           [Locus range 2845847-2846776 bp]: array | spacers
           [Locus range 2855425-2857194 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)