CRISPRone

CRISPRone report for GCA_001516325.2_ASM151632v2

♦ Seq 1: CP008860.2 Pseudomonas aeruginosa strain H27930, complete genome

⇒Summary: seq-len = 6568228 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1543749-1544557 bp 2 Locus 2: 2882641-2893383 bp Zoom in on locus 1 x14 Zoom in on locus 2 x6 x31 CRISPR array Location: 1543749-1544557 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1543749-1544557 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 2882641-2882969 bp Num of repeats: 6 Spacers: s14-s18 CRISPR array Location: 2882641-2882969 bp Num of repeats: 6 Spacers: s14-s18 Gene: cd09739:cas6f Type: other Location: 2883153-2883716 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2883720-2884748 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2884759-2885742 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2885729-2887033 bp Gene: COG1203:cas3 Type: Type-I Location: 2887091-2890321 bp Gene: cd09718:cas1 Type: universal Location: 2890318-2891292 bp CRISPR array Location: 2891553-2893383 bp Num of repeats: 31 Spacers: s19-s48 CRISPR array Location: 2891553-2893383 bp Num of repeats: 31 Spacers: s19-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1543749-1544557 bp]: array | spacers
           [Locus range 2882641-2882969 bp]: array | spacers
           [Locus range 2891553-2893383 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)