CRISPRone

CRISPRone report for GCA_001542795.2_ASM154279v2

♦ Seq 1: CP008872.2 Pseudomonas aeruginosa strain X78812, complete genome

⇒Summary: seq-len = 6348761 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1513945-1515114 bp 2 Locus 2: 2809126-2819745 bp Zoom in on locus 1 x20 Zoom in on locus 2 x7 x28 CRISPR array Location: 1513945-1515114 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 1513945-1515114 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 2809126-2809514 bp Num of repeats: 7 Spacers: s20-s25 CRISPR array Location: 2809126-2809514 bp Num of repeats: 7 Spacers: s20-s25 Gene: cd09739:cas6f Type: other Location: 2809697-2810260 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2810264-2811292 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2811303-2812286 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2812273-2813577 bp Gene: COG1203:cas3 Type: Type-I Location: 2813635-2816865 bp Gene: cd09718:cas1 Type: universal Location: 2816862-2817836 bp CRISPR array Location: 2818098-2819745 bp Num of repeats: 28 Spacers: s26-s52 CRISPR array Location: 2818098-2819745 bp Num of repeats: 28 Spacers: s26-s52 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1513945-1515114 bp]: array | spacers
           [Locus range 2809126-2809514 bp]: array | spacers
           [Locus range 2818098-2819745 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)