CRISPRone

CRISPRone report for GCA_001545255.1_ASM154525v1

♦ Seq 1: LRSG01000019.1 Pseudomonas aeruginosa strain AU7511 contig_26, whole genome shotgun sequence

⇒Summary: seq-len = 82387 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34377-44816 bp Zoom in on locus 1 x14 x18 CRISPR array Location: 34377-35186 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 34377-35186 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 35446-36420 bp Gene: COG1203:cas3 Type: Type-I Location: 36417-39647 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39705-41009 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40996-41979 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41990-43018 bp Gene: cd09739:cas6f Type: other Location: 43022-43585 bp CRISPR array Location: 43769-44816 bp Num of repeats: 18 Spacers: s14-s30 CRISPR array Location: 43769-44816 bp Num of repeats: 18 Spacers: s14-s30 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34377-35186 bp]: array | spacers
           [Locus range 43769-44816 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LRSG01000033.1 Pseudomonas aeruginosa strain AU7511 contig_39, whole genome shotgun sequence

⇒Summary: seq-len = 46954 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8446-18803 bp Zoom in on locus 1 x12 x17 CRISPR array Location: 8446-9146 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 8446-9146 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 9918-12599 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12602-14170 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 14167-14697 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14707-15849 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15851-16513 bp Gene: pfam08798:cas6e Type: other Location: 16488-17099 bp Gene: cd09719:cas1 Type: universal Location: 17126-17437 bp Gene: pfam09707:cas2 Type: universal Location: 17434-17733 bp CRISPR array Location: 17798-18803 bp Num of repeats: 17 Spacers: s12-s27 CRISPR array Location: 17798-18803 bp Num of repeats: 17 Spacers: s12-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8446-9146 bp]: array | spacers
           [Locus range 17798-18803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)