CRISPRone

CRISPRone report for GCA_001548135.1_ASM154813v1

♦ Seq 1: AP014839.2 Pseudomonas aeruginosa DNA, complete genome, strain: 8380

⇒Summary: seq-len = 6613260 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1101165-1111750 bp 2 Locus 2: 1581288-1582095 bp Zoom in on locus 1 Zoom in on locus 2 x14 Gene: COG0640:csa3 Type: Subtype-I-A Location: 1101165-1102034 bp Gene: pfam00078:RT Type: other Location: 1106943-1108211 bp Gene: unk Type: unknown Location: 1108361-1108759 bp Gene: unk Type: unknown Location: 1108943-1109122 bp Gene: cls000170:cas4 Type: Type-I Location: 1110206-1111750 bp CRISPR array Location: 1581288-1582095 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1581288-1582095 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1581288-1582095 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)