CRISPRone

CRISPRone report for GCA_001699865.1_ASM169986v1

♦ Seq 1: LIDV01000066.1 Bacteroides fragilis strain 2-078382-3 contig00069, whole genome shotgun sequence

⇒Summary: seq-len = 585236 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 115120-118733 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 115120-115788 bp Gene: unk Type: unknown Location: 115791-116564 bp Gene: unk Type: unknown Location: 116572-117837 bp Gene: pfam13280:WYL Type: other Location: 117834-118733 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LIDV01000126.1 Bacteroides fragilis strain 2-078382-3 contig00129, whole genome shotgun sequence

⇒Summary: seq-len = 323351 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1250-9585 bp Zoom in on locus 1 x20 CRISPR array Location: 1250-2750 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 1250-2750 bp Num of repeats: 20 Spacers: s1-s19 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2859-3191 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 3195-4127 bp Gene: unk Type: unknown Location: 4247-4555 bp Gene: unk Type: unknown Location: 4622-5146 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 5162-9472 bp antiRepeat Location: 9540-9585 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1250-2750 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)