CRISPRone

CRISPRone report for GCA_001699885.1_ASM169988v1

♦ Seq 1: LIDS01000113.1 Bacteroides fragilis strain 86-5443-2-2 contig00113, whole genome shotgun sequence

⇒Summary: seq-len = 350802 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 114782-118395 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 114782-115450 bp Gene: unk Type: unknown Location: 115453-116226 bp Gene: unk Type: unknown Location: 116234-117499 bp Gene: pfam13280:WYL Type: other Location: 117496-118395 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LIDS01000139.1 Bacteroides fragilis strain 86-5443-2-2 contig00139, whole genome shotgun sequence

⇒Summary: seq-len = 142931 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 857-8315 bp Zoom in on locus 1 x10 CRISPR array Location: 857-1593 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 857-1593 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1702-2034 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2038-2970 bp Gene: unk Type: unknown Location: 3090-3398 bp Gene: unk Type: unknown Location: 3465-3989 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4005-8315 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 857-1593 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)