CRISPRone

CRISPRone report for GCA_001721845.1_ASM172184v1

♦ Seq 1: CP012584.1 Pseudomonas aeruginosa strain PA_D25, complete genome

⇒Summary: seq-len = 6683204 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2935079-2945928 bp 2 Locus 2: 6193487-6204727 bp Zoom in on locus 1 x29 x10 Zoom in on locus 2 CRISPR array Location: 2935079-2936787 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 2935079-2936787 bp Num of repeats: 29 Spacers: s1-s28 Gene: cd09739:cas6f Type: other Location: 2936970-2937533 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2937537-2938565 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2938576-2939559 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2939546-2940850 bp Gene: COG1203:cas3 Type: Type-I Location: 2940908-2944138 bp Gene: cd09718:cas1 Type: universal Location: 2944135-2945109 bp CRISPR array Location: 2945361-2945928 bp Num of repeats: 10 Spacers: s29-s37 CRISPR array Location: 2945361-2945928 bp Num of repeats: 10 Spacers: s29-s37 Gene: cd09710:cas3 Type: Subtype-I-D Location: 6193487-6196294 bp Gene: unk Type: unknown Location: 6196297-6198882 bp Gene: unk Type: unknown Location: 6199583-6203323 bp Gene: mkCas0115:csx3 Type: other Location: 6203347-6203808 bp Gene: pfam13280:WYL Type: other Location: 6203813-6204727 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2935079-2936787 bp]: array | spacers
           [Locus range 2945361-2945928 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)