CRISPRone

CRISPRone report for GCA_001722025.1_ASM172202v1

♦ Seq 1: CP012579.1 Pseudomonas aeruginosa strain PA_D5, complete genome

⇒Summary: seq-len = 6681992 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2933844-2944693 bp 2 Locus 2: 6192274-6203514 bp Zoom in on locus 1 x29 x10 Zoom in on locus 2 CRISPR array Location: 2933844-2935552 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 2933844-2935552 bp Num of repeats: 29 Spacers: s1-s28 Gene: cd09739:cas6f Type: other Location: 2935735-2936298 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2936302-2937330 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2937341-2938324 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2938311-2939615 bp Gene: COG1203:cas3 Type: Type-I Location: 2939673-2942903 bp Gene: cd09718:cas1 Type: universal Location: 2942900-2943874 bp CRISPR array Location: 2944126-2944693 bp Num of repeats: 10 Spacers: s29-s37 CRISPR array Location: 2944126-2944693 bp Num of repeats: 10 Spacers: s29-s37 Gene: cd09710:cas3 Type: Subtype-I-D Location: 6192274-6195081 bp Gene: unk Type: unknown Location: 6195084-6197669 bp Gene: unk Type: unknown Location: 6198370-6202110 bp Gene: mkCas0115:csx3 Type: other Location: 6202134-6202595 bp Gene: pfam13280:WYL Type: other Location: 6202600-6203514 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2933844-2935552 bp]: array | spacers
           [Locus range 2944126-2944693 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)