CRISPRone

CRISPRone report for GCA_001756425.1_ASM175642v1

♦ Seq 1: LZQK01000223.1 Pseudomonas aeruginosa strain 9AR3 scaffold3.1, whole genome shotgun sequence

⇒Summary: seq-len = 405515 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 127605-128593 bp Zoom in on locus 1 x17 CRISPR array Location: 127605-128593 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 127605-128593 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 127605-128593 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LZQK01000234.1 Pseudomonas aeruginosa strain 9AR3 scaffold32.1, whole genome shotgun sequence

⇒Summary: seq-len = 57653 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17362-29936 bp Zoom in on locus 1 x36 x25 CRISPR array Location: 17362-19491 bp Num of repeats: 36 Spacers: s1-s35 CRISPR array Location: 17362-19491 bp Num of repeats: 36 Spacers: s1-s35 Gene: cd09739:cas6f Type: other Location: 19673-20236 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 20240-21268 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 21279-22262 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 22249-23556 bp Gene: COG1203:cas3 Type: Type-I Location: 24006-27236 bp Gene: cd09718:cas1 Type: universal Location: 27233-28207 bp CRISPR array Location: 28468-29936 bp Num of repeats: 25 Spacers: s36-s59 CRISPR array Location: 28468-29936 bp Num of repeats: 25 Spacers: s36-s59 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 17362-19491 bp]: array | spacers
           [Locus range 28468-29936 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)