CRISPRone

CRISPRone report for GCA_001757585.1_ASM175758v1

♦ Seq 1: JFOH01000055.1 Clostridioides difficile strain 19.3 contig_55, whole genome shotgun sequence

⇒Summary: seq-len = 438180 bp; # of CRISPR array = 6; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30073-30695 bp]: array | spacers
           [Locus range 140013-140369 bp]: array | spacers
           [Locus range 230203-230758 bp]: array | spacers
           [Locus range 231360-232116 bp]: array | spacers
           [Locus range 233769-234059 bp]: array | spacers
           [Locus range 366460-366754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JFOH01000056.1 Clostridioides difficile strain 19.3 contig_56, whole genome shotgun sequence

⇒Summary: seq-len = 57125 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10097-10978 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JFOH01000001.1 Clostridioides difficile strain 19.3 contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 252461 bp; # of CRISPR array = 0; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JFOH01000004.1 Clostridioides difficile strain 19.3 contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 369771 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 189502-190058 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)