CRISPRone

CRISPRone report for GCA_001757615.1_ASM175761v1

♦ Seq 1: JFOI01000002.1 Clostridioides difficile strain H3 contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 6936 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 860-1218 bp]: array | spacers
           [Locus range 2892-3446 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JFOI01000009.1 Clostridioides difficile strain H3 contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 217879 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 125138-125894 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JFOI01000047.1 Clostridioides difficile strain H3 contig_47, whole genome shotgun sequence

⇒Summary: seq-len = 190905 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 171734-172288 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JFOI01000056.1 Clostridioides difficile strain H3 contig_56, whole genome shotgun sequence

⇒Summary: seq-len = 178486 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 174140-174563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JFOI01000044.1 Clostridioides difficile strain H3 contig_44, whole genome shotgun sequence

⇒Summary: seq-len = 485192 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 229816-229910 bp]: array | spacers
           [Locus range 453133-454731 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JFOI01000071.1 Clostridioides difficile strain H3 contig_71, whole genome shotgun sequence

⇒Summary: seq-len = 6671 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3368-3462 bp]: array | spacers
           [Locus range 5187-5810 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JFOI01000033.1 Clostridioides difficile strain H3 contig_33, whole genome shotgun sequence

⇒Summary: seq-len = 233868 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 147332-147693 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JFOI01000065.1 Clostridioides difficile strain H3 contig_65, whole genome shotgun sequence

⇒Summary: seq-len = 478769 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12213-12637 bp]: array | spacers
           [Locus range 361160-361645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JFOI01000021.1 Clostridioides difficile strain H3 contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 172733 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 126947-127040 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)