CRISPRone

CRISPRone report for GCA_001792835.1_ASM179283v1

♦ Seq 1: CP015001.1 Pseudomonas aeruginosa strain PA1088, complete genome

⇒Summary: seq-len = 6721480 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5428082-5438493 bp Zoom in on locus 1 x40 CRISPR array Location: 5428082-5430701 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 5428082-5430701 bp Num of repeats: 40 Spacers: s1-s39 Gene: cd09725:cas2 Type: universal Location: 5430883-5431173 bp Gene: cd09721:cas1 Type: universal Location: 5431183-5432223 bp Gene: pfam01930:cas4 Type: Type-I Location: 5432227-5432859 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 5432878-5433747 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 5433744-5435537 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 5435534-5436208 bp Gene: cd09641:cas3HD Type: Type-I Location: 5436259-5438493 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5428082-5430701 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)