CRISPRone

CRISPRone report for GCA_001857645.1_ASM185764v1

♦ Seq 1: KV860241.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold51, whole genome shotgun sequence

⇒Summary: seq-len = 236221 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KV860212.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold229, whole genome shotgun sequence

⇒Summary: seq-len = 113829 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 55122-55745 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: KV860216.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold253, whole genome shotgun sequence

⇒Summary: seq-len = 79062 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 404-891 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: KV860259.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold655, whole genome shotgun sequence

⇒Summary: seq-len = 166254 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53176-53962 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: KV860199.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold104, whole genome shotgun sequence

⇒Summary: seq-len = 142064 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23801-24144 bp]: array | spacers
           [Locus range 116564-116790 bp]: array | spacers
           [Locus range 118654-118944 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: KV860271.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold977, whole genome shotgun sequence

⇒Summary: seq-len = 328790 bp; # of CRISPR array = 3; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 207792-208756 bp]: array | spacers
           [Locus range 235718-236212 bp]: array | spacers
           [Locus range 328451-328791 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: KV860261.1 Clostridioides difficile strain HMSC19D05 genomic scaffold Scaffold716, whole genome shotgun sequence

⇒Summary: seq-len = 88816 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34751-35406 bp]: array | spacers
           [Locus range 77026-77121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)