CRISPRone

CRISPRone report for GCA_001909495.1_ASM190949v1

♦ Seq 1: MPVA01000077.1 Pseudomonas aeruginosa strain 560747 contig_77, whole genome shotgun sequence

⇒Summary: seq-len = 8347 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7163-7790 bp Zoom in on locus 1 x11 CRISPR array Location: 7163-7790 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 7163-7790 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 7163-7790 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPVA01000074.1 Pseudomonas aeruginosa strain 560747 contig_74, whole genome shotgun sequence

⇒Summary: seq-len = 85139 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42304-52889 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 42304-43173 bp Gene: pfam00078:RT Type: other Location: 48082-49350 bp Gene: unk Type: unknown Location: 49500-49898 bp Gene: unk Type: unknown Location: 50082-50261 bp Gene: cls000170:cas4 Type: Type-I Location: 51345-52889 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPVA01000073.1 Pseudomonas aeruginosa strain 560747 contig_73, whole genome shotgun sequence

⇒Summary: seq-len = 39146 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14214-19686 bp Zoom in on locus 1 Gene: cd09708:DinG Type: Subtype-IV-A Location: 14214-16388 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 16477-17202 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 17231-17986 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 17986-19029 bp Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 19036-19686 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)