CRISPRone

CRISPRone report for GCA_001909775.1_ASM190977v1

♦ Seq 1: MPVE01000171.1 Pseudomonas aeruginosa strain CL232 contig_171, whole genome shotgun sequence

⇒Summary: seq-len = 66568 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34069-44513 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 34069-34757 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 34069-34757 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 35006-35569 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 35573-36601 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36612-37595 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 37582-38886 bp Gene: COG1203:cas3 Type: Type-I Location: 38944-42174 bp Gene: cd09718:cas1 Type: universal Location: 42171-43145 bp CRISPR array Location: 43406-44513 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 43406-44513 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34069-34757 bp]: array | spacers
           [Locus range 43406-44513 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)