CRISPRone

CRISPRone report for GCA_001910365.1_ASM191036v1

♦ Seq 1: MPVF01000063.1 Pseudomonas aeruginosa strain CLB24226 contig_63, whole genome shotgun sequence

⇒Summary: seq-len = 85204 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42289-52874 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 42289-43158 bp Gene: pfam00078:RT Type: other Location: 48067-49335 bp Gene: unk Type: unknown Location: 49485-49883 bp Gene: unk Type: unknown Location: 50067-50246 bp Gene: cls000170:cas4 Type: Type-I Location: 51330-52874 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPVF01000092.1 Pseudomonas aeruginosa strain CLB24226 contig_92, whole genome shotgun sequence

⇒Summary: seq-len = 8247 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 482-1110 bp Zoom in on locus 1 x11 CRISPR array Location: 482-1110 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 482-1110 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 482-1110 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)