CRISPRone

CRISPRone report for GCA_001914085.1_ASM191408v1

♦ Seq 1: MKXZ01000072.1 Pseudomonas aeruginosa isolate 0511A_66_19 0511A0202_scaffold_91, whole genome shotgun sequence

⇒Summary: seq-len = 68232 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21030-31655 bp Zoom in on locus 1 x21 x13 CRISPR array Location: 21030-22259 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 21030-22259 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09718:cas1 Type: universal Location: 22519-23493 bp Gene: COG1203:cas3 Type: Type-I Location: 23490-26720 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26778-28082 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28069-29052 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29063-30091 bp Gene: cd09739:cas6f Type: other Location: 30095-30658 bp CRISPR array Location: 30908-31655 bp Num of repeats: 13 Spacers: s21-s32 CRISPR array Location: 30908-31655 bp Num of repeats: 13 Spacers: s21-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21030-22259 bp]: array | spacers
           [Locus range 30908-31655 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)