CRISPRone

CRISPRone report for GCA_001937975.1_ASM193797v1

♦ Seq 1: MLQX01000025.1 Pseudomonas aeruginosa strain PSEUDO-LEB NODE_25_length_77154_cov_30.2405_ID_2064, whole genome shotgun sequence

⇒Summary: seq-len = 77154 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65847-75865 bp Zoom in on locus 1 x10 x15 CRISPR array Location: 65847-66415 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 65847-66415 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 66598-67161 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 67165-68193 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 68204-69187 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 69174-70478 bp Gene: COG1203:cas3 Type: Type-I Location: 70536-73766 bp Gene: cd09718:cas1 Type: universal Location: 73763-74737 bp CRISPR array Location: 74998-75865 bp Num of repeats: 15 Spacers: s10-s23 CRISPR array Location: 74998-75865 bp Num of repeats: 15 Spacers: s10-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 65847-66415 bp]: array | spacers
           [Locus range 74998-75865 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)