CRISPRone

CRISPRone report for GCA_001990325.1_ASM199032v1

♦ Seq 1: MULB01000014.1 Pseudomonas aeruginosa strain SCH_ABX16 ABX16_contig000014, whole genome shotgun sequence

⇒Summary: seq-len = 218049 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37551-48402 bp Zoom in on locus 1 x28 x11 CRISPR array Location: 37551-39200 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 37551-39200 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09739:cas6f Type: other Location: 39384-39947 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39951-40979 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40990-41973 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41960-43264 bp Gene: COG1203:cas3 Type: Type-I Location: 43322-46552 bp Gene: cd09718:cas1 Type: universal Location: 46549-47523 bp CRISPR array Location: 47775-48402 bp Num of repeats: 11 Spacers: s28-s37 CRISPR array Location: 47775-48402 bp Num of repeats: 11 Spacers: s28-s37 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37551-39200 bp]: array | spacers
           [Locus range 47775-48402 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)