CRISPRone

CRISPRone report for GCA_001997325.1_ASM199732v1

♦ Seq 1: MTGH01000007.1 Bacteroides fragilis strain ATCC 25285 contig7, whole genome shotgun sequence

⇒Summary: seq-len = 385727 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 801-9673 bp Zoom in on locus 1 x27 CRISPR array Location: 801-2838 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 801-2838 bp Num of repeats: 27 Spacers: s1-s26 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2947-3279 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 3283-4215 bp Gene: unk Type: unknown Location: 4335-4643 bp Gene: unk Type: unknown Location: 4710-5234 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 5250-9560 bp antiRepeat Location: 9628-9673 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 801-2838 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MTGH01000002.1 Bacteroides fragilis strain ATCC 25285 contig2, whole genome shotgun sequence

⇒Summary: seq-len = 453416 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 360674-364287 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 360674-361573 bp Gene: unk Type: unknown Location: 361570-362835 bp Gene: unk Type: unknown Location: 362843-363616 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 363619-364287 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MTGH01000006.1 Bacteroides fragilis strain ATCC 25285 contig6, whole genome shotgun sequence

⇒Summary: seq-len = 198883 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 164496-166812 bp Zoom in on locus 1 x9 CRISPR array Location: 164496-165038 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 164496-165038 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09725:cas2 Type: universal Location: 165251-165514 bp Gene: cd09722:cas1 Type: universal Location: 165517-165756 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 165749-166129 bp Gene: cd09652:cas6 Type: other Location: 166141-166812 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 164496-165038 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)