CRISPRone

CRISPRone report for GCA_002021595.1_ASM202159v1

♦ Seq 1: MWIE01000046.1 Pseudomonas aeruginosa strain COPD2a Contig46, whole genome shotgun sequence

⇒Summary: seq-len = 47911 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36469-46913 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36469-37157 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36469-37157 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37406-37969 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37973-39001 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39012-39995 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39982-41286 bp Gene: COG1203:cas3 Type: Type-I Location: 41344-44574 bp Gene: cd09718:cas1 Type: universal Location: 44571-45545 bp CRISPR array Location: 45806-46913 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 45806-46913 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36469-37157 bp]: array | spacers
           [Locus range 45806-46913 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)